STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABOM_006538PHD finger and BAH domain protein (Snt2). (241 aa)    
Predicted Functional Partners:
ABOM_005983
Protein eaf6.
    
 0.946
ABOM_008978
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.822
ABOM_005522
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.822
ABOM_005302
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.822
ABOM_006539
PHD finger and BAH domain protein (Snt2).
 
      0.711
ABOM_011978
Chromatin modification-related protein.
    
 0.540
ABOM_011550
PHD finger domain protein.
    
 0.540
ABOM_011266
Uncharacterized protein.
    
 0.540
ABOM_011007
Uncharacterized protein.
    
 0.540
ABOM_010300
Chromatin modification-related protein.
    
 0.540
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.