STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABOM_005193Zn(II)2Cys6 transcription factor. (298 aa)    
Predicted Functional Partners:
ABOM_010538
NADH dehydrogenase.
   
   0.692
ABOM_005002
NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
   0.674
ABOM_008977
Uncharacterized protein.
   
   0.640
ABOM_008101
NADH:ubiquinone oxidoreductase kD subunit.
   
   0.636
ABOM_006132
NADH-ubiquinone oxidoreductase subunit; Belongs to the complex I 49 kDa subunit family.
   
   0.635
ABOM_001229
NADH-ubiquinone oxidoreductase subunit.
   
   0.627
ABOM_004527
Lactobacillus shifted protein.
   
   0.623
ABOM_001131
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
   0.618
ABOM_003696
DNA polymerase delta subunit 2.
    
 0.610
ABOM_011881
NADH-ubiquinone oxidoreductase subunit.
   
   0.603
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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