STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABOM_004734Uncharacterized protein. (261 aa)    
Predicted Functional Partners:
ABOM_009981
Ribosomal protein L26.
  
 0.993
ABOM_001152
KOW domain-containing protein.
  
 0.993
ABOM_011371
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
  
 0.992
ABOM_008266
Ribosomal_L23eN domain-containing protein.
   
 0.992
ABOM_005954
Uncharacterized protein.
   
 0.992
ABOM_007198
Uncharacterized protein.
  
 0.992
ABOM_006510
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.992
ABOM_004218
Ribosomal protein L35.
   
 0.992
ABOM_003485
Uncharacterized protein.
   
 0.992
ABOM_001366
Uncharacterized protein.
   
 0.992
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.