STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABOM_005134C-5 sterol desaturase; Belongs to the sterol desaturase family. (239 aa)    
Predicted Functional Partners:
ABOM_010794
C-4 methylsterol oxidase; Belongs to the sterol desaturase family.
  
 0.977
ABOM_010644
C-4 methylsterol oxidase; Belongs to the sterol desaturase family.
  
 0.976
ABOM_010887
Squalene synthase.
  
 0.975
ABOM_011566
Uncharacterized protein.
   
 0.970
ABOM_002249
C-8 sterol isomerase.
   
 0.937
ABOM_003224
Phytoene synthase.
  
 0.933
ABOM_011931
Ergosterol biosynthetic protein 28.
   
 
 0.926
ABOM_006680
Sterol 24-C-methyltransferase; Catalyzes the methyl transfer from S-adenosyl-methionine to the C-24 of zymosterol to form fecosterol.
   
 
 0.919
ABOM_005378
Methyltransf_11 domain-containing protein.
   
 
 0.919
ABOM_007199
Sterol desaturase family; Belongs to the sterol desaturase family.
   
 0.907
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.