Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABOM_000637 | ABOM_004214 | A0A1F8AGI0 | A0A1F8A775 | Uncharacterized protein. | GTP-binding protein. | 0.993 |
ABOM_000637 | ABOM_005102 | A0A1F8AGI0 | A0A1F8A4R0 | Uncharacterized protein. | ATP-dependent RNA helicase mss116; Belongs to the DEAD box helicase family. | 0.958 |
ABOM_000637 | ABOM_005161 | A0A1F8AGI0 | A0A1F8A5Y0 | Uncharacterized protein. | Putative ribosome assembly protein Noc2. | 0.990 |
ABOM_000637 | ABOM_008909 | A0A1F8AGI0 | A0A1F7ZR10 | Uncharacterized protein. | Putative rRNA processing protein (Ebp2). | 0.993 |
ABOM_000637 | ABOM_010138 | A0A1F8AGI0 | A0A1F7ZP90 | Uncharacterized protein. | Nucleolar GTP-binding protein 1. | 0.991 |
ABOM_000637 | ABOM_012014 | A0A1F8AGI0 | A0A1F7ZIN0 | Uncharacterized protein. | rRNA processing protein gar2. | 0.998 |
ABOM_000637 | ERB1 | A0A1F8AGI0 | A0A1F7ZWE7 | Uncharacterized protein. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.993 |
ABOM_000637 | NOP7 | A0A1F8AGI0 | A0A1F8A5R1 | Uncharacterized protein. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.990 |
ABOM_000637 | SPB1 | A0A1F8AGI0 | A0A1F7ZPZ8 | Uncharacterized protein. | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.990 |
ABOM_000637 | YTM1 | A0A1F8AGI0 | A0A1F8A5X7 | Uncharacterized protein. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.993 |
ABOM_004214 | ABOM_000637 | A0A1F8A775 | A0A1F8AGI0 | GTP-binding protein. | Uncharacterized protein. | 0.993 |
ABOM_004214 | ABOM_005102 | A0A1F8A775 | A0A1F8A4R0 | GTP-binding protein. | ATP-dependent RNA helicase mss116; Belongs to the DEAD box helicase family. | 0.978 |
ABOM_004214 | ABOM_005161 | A0A1F8A775 | A0A1F8A5Y0 | GTP-binding protein. | Putative ribosome assembly protein Noc2. | 0.994 |
ABOM_004214 | ABOM_008909 | A0A1F8A775 | A0A1F7ZR10 | GTP-binding protein. | Putative rRNA processing protein (Ebp2). | 0.999 |
ABOM_004214 | ABOM_010138 | A0A1F8A775 | A0A1F7ZP90 | GTP-binding protein. | Nucleolar GTP-binding protein 1. | 0.996 |
ABOM_004214 | ABOM_012014 | A0A1F8A775 | A0A1F7ZIN0 | GTP-binding protein. | rRNA processing protein gar2. | 0.997 |
ABOM_004214 | ERB1 | A0A1F8A775 | A0A1F7ZWE7 | GTP-binding protein. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.998 |
ABOM_004214 | NOP7 | A0A1F8A775 | A0A1F8A5R1 | GTP-binding protein. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.999 |
ABOM_004214 | SPB1 | A0A1F8A775 | A0A1F7ZPZ8 | GTP-binding protein. | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.991 |
ABOM_004214 | YTM1 | A0A1F8A775 | A0A1F8A5X7 | GTP-binding protein. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.996 |
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