STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABOM_005096GTP-binding protein Obg. (505 aa)    
Predicted Functional Partners:
ABOM_007822
Mitochondrial 54S ribosomal protein YmL19; Belongs to the universal ribosomal protein uL11 family.
  
 
 0.957
ABOM_007172
Uncharacterized protein.
 
 
 0.952
ABOM_007031
Mitochondrial 54S ribosomal protein YmL8; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.951
ABOM_010792
Uncharacterized protein.
  
 
 0.941
ABOM_003669
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
    
 
 0.933
ABOM_009981
Ribosomal protein L26.
   
 
 0.927
ABOM_011086
Mitochondrial 54S ribosomal protein IMG1.
  
 
 0.924
ABOM_011349
Mitochondrial 54S ribosomal protein YmL39.
   
   0.896
ABOM_010675
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.895
ABOM_012059
FtsJ domain-containing protein.
   
 
 0.882
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
Server load: low (24%) [HD]