Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABOM_002272 | ABOM_004962 | A0A1F8ABX5 | A0A1F8A524 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1. | 0.756 |
ABOM_002272 | ABOM_005986 | A0A1F8ABX5 | A0A1F7ZY24 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | ATP-dependent RNA helicase eIF4A; Belongs to the DEAD box helicase family. | 0.966 |
ABOM_002272 | ABOM_007006 | A0A1F8ABX5 | A0A1F7ZXG8 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | PAB1 binding protein (Pbp1). | 0.952 |
ABOM_002272 | ABOM_007023 | A0A1F8ABX5 | A0A1F7ZXF3 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | Putative ubiquitin-protein ligase (Rsp5). | 0.882 |
ABOM_002272 | ABOM_007109 | A0A1F8ABX5 | A0A1F7ZZP5 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | Nuclear cap-binding protein subunit 2. | 0.969 |
ABOM_002272 | ABOM_008758 | A0A1F8ABX5 | A0A1F7ZQ36 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | snRNA cap binding complex subunit (Gcr3). | 0.928 |
ABOM_002272 | ABOM_010401 | A0A1F8ABX5 | A0A1F7ZPC4 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | Pre-RNA splicing factor Srp2. | 0.751 |
ABOM_002272 | ABOM_010864 | A0A1F8ABX5 | A0A1F7ZLS6 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | Eukaryotic translation initiation factor 4E-1; Belongs to the eukaryotic initiation factor 4E family. | 0.979 |
ABOM_002272 | ABOM_011012 | A0A1F8ABX5 | A0A1F7ZJX8 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | ATP-dependent RNA helicase dhh1; Belongs to the DEAD box helicase family. | 0.922 |
ABOM_004962 | ABOM_002272 | A0A1F8A524 | A0A1F8ABX5 | Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.756 |
ABOM_004962 | ABOM_005986 | A0A1F8A524 | A0A1F7ZY24 | Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1. | ATP-dependent RNA helicase eIF4A; Belongs to the DEAD box helicase family. | 0.724 |
ABOM_004962 | ABOM_007006 | A0A1F8A524 | A0A1F7ZXG8 | Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1. | PAB1 binding protein (Pbp1). | 0.671 |
ABOM_004962 | ABOM_007023 | A0A1F8A524 | A0A1F7ZXF3 | Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1. | Putative ubiquitin-protein ligase (Rsp5). | 0.795 |
ABOM_004962 | ABOM_007109 | A0A1F8A524 | A0A1F7ZZP5 | Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1. | Nuclear cap-binding protein subunit 2. | 0.667 |
ABOM_004962 | ABOM_008758 | A0A1F8A524 | A0A1F7ZQ36 | Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1. | snRNA cap binding complex subunit (Gcr3). | 0.668 |
ABOM_004962 | ABOM_010401 | A0A1F8A524 | A0A1F7ZPC4 | Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1. | Pre-RNA splicing factor Srp2. | 0.688 |
ABOM_004962 | ABOM_010754 | A0A1F8A524 | A0A1F7ZN29 | Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1. | RNA binding domain protein. | 0.686 |
ABOM_004962 | ABOM_010864 | A0A1F8A524 | A0A1F7ZLS6 | Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1. | Eukaryotic translation initiation factor 4E-1; Belongs to the eukaryotic initiation factor 4E family. | 0.728 |
ABOM_004962 | ABOM_011012 | A0A1F8A524 | A0A1F7ZJX8 | Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1. | ATP-dependent RNA helicase dhh1; Belongs to the DEAD box helicase family. | 0.662 |
ABOM_005986 | ABOM_002272 | A0A1F7ZY24 | A0A1F8ABX5 | ATP-dependent RNA helicase eIF4A; Belongs to the DEAD box helicase family. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.966 |
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