STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABOM_003902Uncharacterized protein. (242 aa)    
Predicted Functional Partners:
ABOM_010873
Putative kinesin family protein (BimC); Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.990
ABOM_006387
UBA/TS-N domain protein.
    
 0.971
ABOM_010121
Putative bifunctional fatty acid transporter and acyl-CoA synthetase.
    
 0.857
ABOM_006854
Long-chain fatty acid transporter.
    
 0.857
ABOM_006944
Very-long-chain acyl-CoA synthetase family protein (CefD1).
    
 0.857
ABOM_007848
Kinesin family protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.838
ABOM_001322
Kinesin family protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
 
 
 0.823
ABOM_010295
EB1 domain protein.
    
 
 0.800
ABOM_012194
BTB domain-containing protein.
    
 0.798
ABOM_011690
BTB domain-containing protein.
    
 0.798
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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