STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABOM_003874Cholinesterase; Belongs to the type-B carboxylesterase/lipase family. (976 aa)    
Predicted Functional Partners:
ABOM_001000
HEAT repeat protein (DRIM).
   
  0.690
ABOM_010188
Putative small nucleolar ribonucleoprotein complex component (Utp5).
   
 0.676
ABOM_009350
Cyclin dependent kinase (Pho85).
    
 0.661
ABOM_007090
Ankyrin repeat-containing protein.
    
 0.661
ABOM_012244
WD domain protein.
   
  0.658
ABOM_009089
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.655
ABOM_007489
Small nucleolar ribonucleoprotein complex subunit (SOF1).
    
  0.655
ABOM_005218
RNA processing protein Emg1.
    
  0.655
ABOM_003049
rRNA-processing protein fcf1.
    
  0.655
ABOM_001392
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
    
  0.655
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.