STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABOM_003860Dihydrodipicolinate synthetase family protein; Belongs to the DapA family. (294 aa)    
Predicted Functional Partners:
ABOM_007025
Aminotransferase.
   
 
 0.823
ABOM_010175
Aspartate aminotransferase.
   
 0.811
ABOM_010243
Aspartate aminotransferase.
   
  0.803
ABOM_003488
Aspartate aminotransferase.
   
  0.803
ABOM_006924
Malate synthase; Belongs to the malate synthase family.
   
 
 0.801
ABOM_008242
Isocitrate lyase.
   
 
  0.795
ABOM_004395
Isocitrate lyase.
   
 
  0.795
ABOM_007760
Hydroxyisocaproate dehydrogenase; Belongs to the universal ribosomal protein uL22 family.
   
 0.794
ABOM_002374
Glyoxylate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.794
ABOM_007001
Aspartate aminotransferase.
   
  0.647
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.