STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABOM_003848Putative short-chain dehydrogenase. (271 aa)    
Predicted Functional Partners:
ABOM_007759
Zinc-dependent alcohol dehydrogenase.
   
 
 0.877
ABOM_004689
D-xylulose reductase A.
   
 
  0.853
ABOM_006936
L-arabitol dehydrogenase.
   
 
  0.847
ABOM_005155
L-arabitol dehydrogenase.
   
 
  0.847
ABOM_000344
Alcohol dehydrogenase.
   
 
  0.847
ABOM_001477
Putative sorbitol dehydrogenase protein.
   
 
  0.748
ABOM_011099
L-xylulose reductase.
  
  
 
0.708
ABOM_001508
L-xylulose reductase.
  
  
 
0.707
ABOM_000014
Uncharacterized protein.
  
  
 
0.682
ABOM_008189
Oxidoreductase.
  
  
 
0.680
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.