STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABOM_002590Uncharacterized protein. (1685 aa)    
Predicted Functional Partners:
ABOM_010171
Serine/threonine-protein kinase ark1.
   
 0.874
ABOM_006090
Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
    
 0.810
ABOM_006091
Uncharacterized protein.
    
 0.810
ABOM_002509
Putative chromosome segregation protein BIR1.
   
 0.764
ABOM_004808
Ran GTPase-activating protein 1.
   
 
 0.683
ABOM_010341
Putative molybdenum cofactor biosynthetic protein (CnxF).
    
 0.650
MDE1
Methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P).
    
 0.600
ABOM_011019
LYR family protein; Belongs to the complex I LYR family.
    
   0.599
ABOM_007528
NADH-ubiquinone oxidoreductase subunit.
   
   0.599
ABOM_006132
NADH-ubiquinone oxidoreductase subunit; Belongs to the complex I 49 kDa subunit family.
   
   0.597
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.