STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABOM_004345Hscarg dehydrogenase. (328 aa)    
Predicted Functional Partners:
ABOM_011535
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.878
ABOM_005878
NADH-ubiquinone oxidoreductase subunit; Belongs to the complex I 30 kDa subunit family.
   
 0.869
ABOM_005426
Cytochrome c1; Belongs to the AAA ATPase family.
   
 0.866
ABOM_007528
NADH-ubiquinone oxidoreductase subunit.
   
 0.851
ABOM_006132
NADH-ubiquinone oxidoreductase subunit; Belongs to the complex I 49 kDa subunit family.
   
 0.851
ABOM_005002
NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
 0.844
ABOM_008968
NADH-ubiquinone oxidoreductase subunit.
   
 0.837
ABOM_007138
NADH-ubiquinone oxidoreductase subunit; Belongs to the complex I 75 kDa subunit family.
   
 0.829
ABOM_011019
LYR family protein; Belongs to the complex I LYR family.
   
 0.828
ABOM_005299
NADH-ubiquinone oxidoreductase subunit.
   
 0.820
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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