STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABOM_004257Adenosylhomocysteinase. (437 aa)    
Predicted Functional Partners:
ABOM_003745
Cobalamin-independent methionine synthase MetH/D.
  
 
 0.974
ABOM_010167
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 0.939
ABOM_012047
Cysteine synthase.
  
 0.921
ABOM_000437
Cysteine synthase 2.
  
 0.921
ABOM_011752
Cystathionine beta-lyase.
  
 0.919
ABOM_010861
Cystathionine gamma-lyase.
  
 0.919
ABOM_007151
O-acetylhomoserine (Thiol)-lyase.
  
 0.919
ABOM_010313
Methionine synthase.
  
 
 0.902
ABOM_003670
Threonine dehydratase.
  
 
 0.899
ABOM_006436
Pyridoxal-phosphate dependent enzyme.
    
 0.896
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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