Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABOM_002830 | ABOM_004017 | A0A1F8A8L1 | A0A1F8ABX9 | Polyadenylation factor subunit CstF64. | Endoribonuclease ysh1. | 0.988 |
ABOM_002830 | ABOM_005356 | A0A1F8A8L1 | A0A1F8A3N7 | Polyadenylation factor subunit CstF64. | Heterogeneous nuclear ribonucleoprotein HRP1. | 0.968 |
ABOM_002830 | ABOM_005535 | A0A1F8A8L1 | A0A1F8A2V2 | Polyadenylation factor subunit CstF64. | Cleavage and polyadenylation specificity factor subunit 2. | 0.986 |
ABOM_002830 | ABOM_006466 | A0A1F8A8L1 | A0A1F8A1A9 | Polyadenylation factor subunit CstF64. | mRNA 3'-end-processing protein yth1. | 0.984 |
ABOM_002830 | ABOM_007092 | A0A1F8A8L1 | A0A1F8A0S5 | Polyadenylation factor subunit CstF64. | Polyadenylation factor subunit 2. | 0.981 |
ABOM_002830 | ABOM_009391 | A0A1F8A8L1 | A0A1F7ZR90 | Polyadenylation factor subunit CstF64. | mRNA cleavage factor complex component Pcf11. | 0.987 |
ABOM_002830 | ABOM_010046 | A0A1F8A8L1 | A0A1F7ZPL6 | Polyadenylation factor subunit CstF64. | mRNA 3'-end-processing protein rna14. | 0.998 |
ABOM_002830 | ABOM_010851 | A0A1F8A8L1 | A0A1F7ZL71 | Polyadenylation factor subunit CstF64. | mRNA cleavage and polyadenylation specificity factor complex subunit. | 0.986 |
ABOM_002830 | ABOM_011263 | A0A1F8A8L1 | A0A1F7ZKH7 | Polyadenylation factor subunit CstF64. | Protein cft1. | 0.988 |
ABOM_002830 | CLP1 | A0A1F8A8L1 | A0A1F7ZJW7 | Polyadenylation factor subunit CstF64. | mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation. | 0.987 |
ABOM_004017 | ABOM_002830 | A0A1F8ABX9 | A0A1F8A8L1 | Endoribonuclease ysh1. | Polyadenylation factor subunit CstF64. | 0.988 |
ABOM_004017 | ABOM_005535 | A0A1F8ABX9 | A0A1F8A2V2 | Endoribonuclease ysh1. | Cleavage and polyadenylation specificity factor subunit 2. | 0.999 |
ABOM_004017 | ABOM_006466 | A0A1F8ABX9 | A0A1F8A1A9 | Endoribonuclease ysh1. | mRNA 3'-end-processing protein yth1. | 0.998 |
ABOM_004017 | ABOM_007092 | A0A1F8ABX9 | A0A1F8A0S5 | Endoribonuclease ysh1. | Polyadenylation factor subunit 2. | 0.999 |
ABOM_004017 | ABOM_009391 | A0A1F8ABX9 | A0A1F7ZR90 | Endoribonuclease ysh1. | mRNA cleavage factor complex component Pcf11. | 0.986 |
ABOM_004017 | ABOM_010046 | A0A1F8ABX9 | A0A1F7ZPL6 | Endoribonuclease ysh1. | mRNA 3'-end-processing protein rna14. | 0.979 |
ABOM_004017 | ABOM_010851 | A0A1F8ABX9 | A0A1F7ZL71 | Endoribonuclease ysh1. | mRNA cleavage and polyadenylation specificity factor complex subunit. | 0.999 |
ABOM_004017 | ABOM_011263 | A0A1F8ABX9 | A0A1F7ZKH7 | Endoribonuclease ysh1. | Protein cft1. | 0.999 |
ABOM_004017 | CLP1 | A0A1F8ABX9 | A0A1F7ZJW7 | Endoribonuclease ysh1. | mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation. | 0.925 |
ABOM_005356 | ABOM_002830 | A0A1F8A3N7 | A0A1F8A8L1 | Heterogeneous nuclear ribonucleoprotein HRP1. | Polyadenylation factor subunit CstF64. | 0.968 |
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