STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABOM_003359Cofilin; Belongs to the actin-binding proteins ADF family. (161 aa)    
Predicted Functional Partners:
ABOM_002426
Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.
   
 0.834
ABOM_011594
Actin-1; Belongs to the actin family.
   
 0.807
ABOM_011208
Actin.
   
 0.807
ABOM_003360
Actin Act1.
   
 0.807
ABOM_003037
Uncharacterized protein; Belongs to the actin family.
   
 0.807
ABOM_004407
Actin; Belongs to the actin family.
   
 0.803
ABOM_009347
Actin-related protein 2/3 complex subunit ARP3; Belongs to the actin family.
   
 0.768
ABOM_011728
Profilin; Belongs to the profilin family.
   
 0.760
ABOM_005359
Actin-related protein 4; Belongs to the actin family.
   
 0.758
ABOM_005351
Actin cortical patch component.
   
 
 0.736
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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