STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABOM_002209Putative sensor histidine kinase/response regulator. (1261 aa)    
Predicted Functional Partners:
ABOM_009219
Phosphotransmitter protein Ypd1.
    
 0.854
ABOM_005195
GATA transcription factor LreA.
    
 
 0.850
ABOM_004166
MAP kinase kinase kinase.
    
 0.675
ABOM_005434
Nucleoside diphosphatase Gda1.
    
 
 0.591
ABOM_001400
Methyltransferase.
    
 
 0.555
ABOM_009774
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.549
ABOM_000346
Pyruvate dehydrogenase (Acetyl-transferring).
    
 0.549
ABOM_010375
Importin subunit alpha; Belongs to the importin alpha family.
      
 0.518
ABOM_012251
Isochorismatase domain-containing protein.
    
 0.512
ABOM_011018
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex.
    
 0.512
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.