STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABOM_001187Uncharacterized protein. (1265 aa)    
Predicted Functional Partners:
ABOM_010781
COG2 domain-containing protein.
   
 0.998
ABOM_010053
Sec34-like family protein.
   
 0.998
ABOM_010396
Dor1-like family protein.
   
 0.998
ABOM_005339
Cog4 domain-containing protein.
    
 0.998
ABOM_003086
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
   
 0.998
ABOM_005916
Uncharacterized protein.
   
 
 0.833
ABOM_011608
Syntaxin 5.
     
 0.824
ABOM_009196
SNARE complex subunit (Tlg2); Belongs to the syntaxin family.
   
 
 0.818
ABOM_002281
GARP complex subunit (Sac2).
   
 
 0.803
ABOM_000613
Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.
     
 0.789
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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