Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABOM_001100 | ABOM_002397 | A0A1F8AG91 | A0A1F8A9Y8 | Putative geranylgeranyl pyrophosphate synthase. | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 0.858 |
ABOM_001100 | ABOM_003224 | A0A1F8AG91 | A0A1F8A969 | Putative geranylgeranyl pyrophosphate synthase. | Phytoene synthase. | 0.888 |
ABOM_001100 | ABOM_003563 | A0A1F8AG91 | A0A1F8ADB0 | Putative geranylgeranyl pyrophosphate synthase. | Geranyltranstransferase; Belongs to the FPP/GGPP synthase family. | 0.875 |
ABOM_001100 | ABOM_003703 | A0A1F8AG91 | A0A1F8A5X8 | Putative geranylgeranyl pyrophosphate synthase. | CaaX farnesyltransferase alpha subunit Ram2. | 0.846 |
ABOM_001100 | ABOM_004100 | A0A1F8AG91 | A0A1F8AD19 | Putative geranylgeranyl pyrophosphate synthase. | Isopentenyl-diphosphate Delta-isomerase. | 0.866 |
ABOM_001100 | ABOM_005229 | A0A1F8AG91 | A0A1F8A3M9 | Putative geranylgeranyl pyrophosphate synthase. | Hexaprenyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.837 |
ABOM_001100 | ABOM_009223 | A0A1F8AG91 | A0A1F7ZUB8 | Putative geranylgeranyl pyrophosphate synthase. | Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. | 0.856 |
ABOM_001100 | ABOM_010887 | A0A1F8AG91 | A0A1F7ZLR9 | Putative geranylgeranyl pyrophosphate synthase. | Squalene synthase. | 0.906 |
ABOM_001100 | ABOM_011386 | A0A1F8AG91 | A0A1F7ZKB9 | Putative geranylgeranyl pyrophosphate synthase. | Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family. | 0.903 |
ABOM_001100 | ABOM_011661 | A0A1F8AG91 | A0A1F7ZKN1 | Putative geranylgeranyl pyrophosphate synthase. | Nuclear undecaprenyl pyrophosphate synthase. | 0.830 |
ABOM_002397 | ABOM_001100 | A0A1F8A9Y8 | A0A1F8AG91 | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | Putative geranylgeranyl pyrophosphate synthase. | 0.858 |
ABOM_002397 | ABOM_003224 | A0A1F8A9Y8 | A0A1F8A969 | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | Phytoene synthase. | 0.511 |
ABOM_002397 | ABOM_003563 | A0A1F8A9Y8 | A0A1F8ADB0 | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | Geranyltranstransferase; Belongs to the FPP/GGPP synthase family. | 0.851 |
ABOM_002397 | ABOM_005229 | A0A1F8A9Y8 | A0A1F8A3M9 | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | Hexaprenyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.851 |
ABOM_002397 | ABOM_010887 | A0A1F8A9Y8 | A0A1F7ZLR9 | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | Squalene synthase. | 0.511 |
ABOM_003224 | ABOM_001100 | A0A1F8A969 | A0A1F8AG91 | Phytoene synthase. | Putative geranylgeranyl pyrophosphate synthase. | 0.888 |
ABOM_003224 | ABOM_002397 | A0A1F8A969 | A0A1F8A9Y8 | Phytoene synthase. | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 0.511 |
ABOM_003224 | ABOM_003563 | A0A1F8A969 | A0A1F8ADB0 | Phytoene synthase. | Geranyltranstransferase; Belongs to the FPP/GGPP synthase family. | 0.930 |
ABOM_003224 | ABOM_003703 | A0A1F8A969 | A0A1F8A5X8 | Phytoene synthase. | CaaX farnesyltransferase alpha subunit Ram2. | 0.882 |
ABOM_003224 | ABOM_004100 | A0A1F8A969 | A0A1F8AD19 | Phytoene synthase. | Isopentenyl-diphosphate Delta-isomerase. | 0.880 |
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