STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABOM_000275Uncharacterized protein. (692 aa)    
Predicted Functional Partners:
ABOM_007118
Acetyl-CoA carboxylase.
   
 0.558
ABOM_006419
Mating-type alpha-pheromone receptor PreB.
   
  
 0.556
ABOM_005231
Putative cytoskeleton assembly control protein Sla2.
    
 0.502
ABOM_011497
Mitochondrial-processing peptidase subunit beta; Belongs to the peptidase M16 family.
   
  0.469
ABOM_000277
DAO domain-containing protein.
      
 0.442
ABOM_007155
Ubiquinol-cytochrome C reductase complex core protein 2.
   
  0.424
ABOM_004815
Proteasome regulatory particle subunit Rpt1; Belongs to the AAA ATPase family.
   
  0.414
ABOM_007836
26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
    
  0.410
ABOM_009192
ABC multidrug transporter Mdr2.
  
  
 
0.400
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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