STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109518572Discs, large homolog 5b (Drosophila), tandem duplicate 1; Belongs to the MAGUK family. (1808 aa)    
Predicted Functional Partners:
LOC109520909
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.796
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
0.796
polr2f
Polymerase (RNA) II (DNA directed) polypeptide F.
  
  
 0.549
ENSHCOP00000003624
PDZ domain-containing protein.
   
 0.547
LOC109527739
SH3 and multiple ankyrin repeat domains 1.
   
 0.547
shank2
SH3 and multiple ankyrin repeat domains 2a.
   
 0.547
ENSHCOP00000014773
PDZ domain-containing protein.
   
 0.547
ENSHCOP00000025554
PDZ domain-containing protein.
   
 0.547
ENSHCOP00000000050
ANF_receptor domain-containing protein.
   
 0.545
LOC109509255
CaM_bdg_C0 domain-containing protein.
   
 0.545
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.