Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
coq4 | dnlz | ENSHCOP00000002566 | ENSHCOP00000000676 | Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial; Component of the coenzyme Q biosynthetic pathway. May play a role in organizing a multi-subunit COQ enzyme complex required for coenzyme Q biosynthesis. Required for steady-state levels of other COQ polypeptides; Belongs to the COQ4 family. | DNL-type zinc finger. | 0.528 |
coq4 | suox | ENSHCOP00000002566 | ENSHCOP00000015984 | Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial; Component of the coenzyme Q biosynthetic pathway. May play a role in organizing a multi-subunit COQ enzyme complex required for coenzyme Q biosynthesis. Required for steady-state levels of other COQ polypeptides; Belongs to the COQ4 family. | Sulfite oxidase. | 0.722 |
dnlz | coq4 | ENSHCOP00000000676 | ENSHCOP00000002566 | DNL-type zinc finger. | Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial; Component of the coenzyme Q biosynthetic pathway. May play a role in organizing a multi-subunit COQ enzyme complex required for coenzyme Q biosynthesis. Required for steady-state levels of other COQ polypeptides; Belongs to the COQ4 family. | 0.528 |
dnlz | drap1 | ENSHCOP00000000676 | ENSHCOP00000022257 | DNL-type zinc finger. | DR1-associated protein 1 (negative cofactor 2 alpha). | 0.434 |
dnlz | grpel1 | ENSHCOP00000000676 | ENSHCOP00000025656 | DNL-type zinc finger. | GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family. | 0.606 |
dnlz | hspa9 | ENSHCOP00000000676 | ENSHCOP00000018775 | DNL-type zinc finger. | Heat shock protein 9; Belongs to the heat shock protein 70 family. | 0.926 |
dnlz | suox | ENSHCOP00000000676 | ENSHCOP00000015984 | DNL-type zinc finger. | Sulfite oxidase. | 0.503 |
dnlz | timm13 | ENSHCOP00000000676 | ENSHCOP00000028005 | DNL-type zinc finger. | Translocase of inner mitochondrial membrane 13 homolog (yeast); Belongs to the small Tim family. | 0.595 |
dnlz | timm44 | ENSHCOP00000000676 | ENSHCOP00000027865 | DNL-type zinc finger. | Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family. | 0.595 |
dnlz | timm50 | ENSHCOP00000000676 | ENSHCOP00000003585 | DNL-type zinc finger. | Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. | 0.464 |
dnlz | usp37 | ENSHCOP00000000676 | ENSHCOP00000005078 | DNL-type zinc finger. | Ubiquitin carboxyl-terminal hydrolase. | 0.471 |
dnlz | wdr89 | ENSHCOP00000000676 | ENSHCOP00000016939 | DNL-type zinc finger. | WD repeat domain 89. | 0.487 |
drap1 | dnlz | ENSHCOP00000022257 | ENSHCOP00000000676 | DR1-associated protein 1 (negative cofactor 2 alpha). | DNL-type zinc finger. | 0.434 |
grpel1 | dnlz | ENSHCOP00000025656 | ENSHCOP00000000676 | GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family. | DNL-type zinc finger. | 0.606 |
grpel1 | hspa9 | ENSHCOP00000025656 | ENSHCOP00000018775 | GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family. | Heat shock protein 9; Belongs to the heat shock protein 70 family. | 0.983 |
grpel1 | timm13 | ENSHCOP00000025656 | ENSHCOP00000028005 | GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family. | Translocase of inner mitochondrial membrane 13 homolog (yeast); Belongs to the small Tim family. | 0.632 |
grpel1 | timm44 | ENSHCOP00000025656 | ENSHCOP00000027865 | GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family. | Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family. | 0.987 |
grpel1 | timm50 | ENSHCOP00000025656 | ENSHCOP00000003585 | GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family. | Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. | 0.811 |
hspa9 | dnlz | ENSHCOP00000018775 | ENSHCOP00000000676 | Heat shock protein 9; Belongs to the heat shock protein 70 family. | DNL-type zinc finger. | 0.926 |
hspa9 | grpel1 | ENSHCOP00000018775 | ENSHCOP00000025656 | Heat shock protein 9; Belongs to the heat shock protein 70 family. | GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family. | 0.983 |
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