Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC109525107 | LOC109527621 | ENSHCOP00000000820 | ENSHCOP00000022411 | X-ray repair complementing defective repair in Chinese hamster cells 4. | Uncharacterized protein. | 0.844 |
LOC109525107 | aptx | ENSHCOP00000000820 | ENSHCOP00000014749 | X-ray repair complementing defective repair in Chinese hamster cells 4. | Aprataxin. | 0.844 |
LOC109525107 | lig3 | ENSHCOP00000000820 | ENSHCOP00000007928 | X-ray repair complementing defective repair in Chinese hamster cells 4. | DNA ligase. | 0.854 |
LOC109525107 | lig4 | ENSHCOP00000000820 | ENSHCOP00000023467 | X-ray repair complementing defective repair in Chinese hamster cells 4. | DNA ligase. | 0.996 |
LOC109525107 | mapre1 | ENSHCOP00000000820 | ENSHCOP00000003339 | X-ray repair complementing defective repair in Chinese hamster cells 4. | Microtubule-associated protein, RP/EB family, member 1b. | 0.842 |
LOC109525107 | pnkp | ENSHCOP00000000820 | ENSHCOP00000024663 | X-ray repair complementing defective repair in Chinese hamster cells 4. | Polynucleotide kinase 3'-phosphatase. | 0.833 |
LOC109525107 | prkdc | ENSHCOP00000000820 | ENSHCOP00000009008 | X-ray repair complementing defective repair in Chinese hamster cells 4. | Protein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family. | 0.970 |
LOC109525107 | xrcc4 | ENSHCOP00000000820 | ENSHCOP00000013998 | X-ray repair complementing defective repair in Chinese hamster cells 4. | Uncharacterized protein. | 0.911 |
LOC109525107 | xrcc5 | ENSHCOP00000000820 | ENSHCOP00000026645 | X-ray repair complementing defective repair in Chinese hamster cells 4. | X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. | 0.958 |
LOC109525107 | xrcc6 | ENSHCOP00000000820 | ENSHCOP00000007729 | X-ray repair complementing defective repair in Chinese hamster cells 4. | X-ray repair complementing defective repair in Chinese hamster cells 6. | 0.965 |
LOC109527621 | LOC109525107 | ENSHCOP00000022411 | ENSHCOP00000000820 | Uncharacterized protein. | X-ray repair complementing defective repair in Chinese hamster cells 4. | 0.844 |
LOC109527621 | aptx | ENSHCOP00000022411 | ENSHCOP00000014749 | Uncharacterized protein. | Aprataxin. | 0.695 |
LOC109527621 | lig3 | ENSHCOP00000022411 | ENSHCOP00000007928 | Uncharacterized protein. | DNA ligase. | 0.799 |
LOC109527621 | lig4 | ENSHCOP00000022411 | ENSHCOP00000023467 | Uncharacterized protein. | DNA ligase. | 0.814 |
LOC109527621 | pnkp | ENSHCOP00000022411 | ENSHCOP00000024663 | Uncharacterized protein. | Polynucleotide kinase 3'-phosphatase. | 0.599 |
LOC109527621 | prkdc | ENSHCOP00000022411 | ENSHCOP00000009008 | Uncharacterized protein. | Protein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family. | 0.529 |
LOC109527621 | xrcc4 | ENSHCOP00000022411 | ENSHCOP00000013998 | Uncharacterized protein. | Uncharacterized protein. | 0.742 |
LOC109527621 | xrcc5 | ENSHCOP00000022411 | ENSHCOP00000026645 | Uncharacterized protein. | X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. | 0.956 |
LOC109527621 | xrcc6 | ENSHCOP00000022411 | ENSHCOP00000007729 | Uncharacterized protein. | X-ray repair complementing defective repair in Chinese hamster cells 6. | 0.934 |
aptx | LOC109525107 | ENSHCOP00000014749 | ENSHCOP00000000820 | Aprataxin. | X-ray repair complementing defective repair in Chinese hamster cells 4. | 0.844 |
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