Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
PNPT1Polyribonucleotide nucleotidyltransferase 1. (660 aa)    
Predicted Functional Partners:
supv3l1
SUV3-like helicase.
   
 0.990
pmpca
Peptidase (mitochondrial processing) alpha; Belongs to the peptidase M16 family.
  
 
 0.915
chek2
Checkpoint kinase 2.
      
 0.891
aldh1a2
Aldehyde dehydrogenase 1 family, member A2; Belongs to the aldehyde dehydrogenase family.
  
  
 0.877
LOC109519577
Uncharacterized protein.
    
 
 0.844
LOC109523676
Peptidase (mitochondrial processing) beta; Belongs to the peptidase M16 family.
  
 
 0.814
LOC109522213
Ubiquinol-cytochrome c reductase core protein 1.
  
 
 0.814
exosc10
Exosome component 10.
   
 
 0.797
fdxacb1
Ferredoxin-fold anticodon binding domain containing 1.
  
  
 0.765
nup153
Nucleoporin 153.
   
   0.753
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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