STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSHCOP00000002083CARD domain-containing protein. (98 aa)    
Predicted Functional Partners:
ENSHCOP00000002698
CARD domain-containing protein.
  
  
 
0.902
LOC109521819
Uncharacterized protein.
     
  0.900
Apaf1
Apoptotic peptidase activating factor 1.
    
 0.826
LOC109512265
PYD and CARD domain containing.
   
 0.772
ENSHCOP00000006213
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.705
birc6
Baculoviral IAP repeat containing 6.
   
 0.705
LOC109513432
Interleukin-1.
   
 0.699
appl2
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
    
 0.659
appl1
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
    
 0.659
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.573
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.