STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109519680Basic leucine zipper nuclear factor 1. (379 aa)    
Predicted Functional Partners:
LOC109520539
Golgi reassembly stacking protein 2.
   
 0.844
ENSHCOP00000023177
GRASP55_65 domain-containing protein.
   
 0.844
LOC109512804
Golgi reassembly stacking protein 1a.
   
 0.844
rab2a
RAB2A, member RAS oncogene family.
    
 0.808
dnajc27
DnaJ (Hsp40) homolog, subfamily C, member 27.
    
 0.683
acbd3
Acyl-Coenzyme A binding domain containing 3.
    
 
 0.568
Ulk3
Protein kinase domain-containing protein.
      
 0.495
Mbd4
Methyl-CpG binding domain protein 4.
   
    0.456
golga5
Golgin A5.
   
  
 0.421
LOC109518998
Leucine rich adaptor protein 1.
      
 0.407
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.