STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109522347ADP-ribosylation factor 3. (181 aa)    
Predicted Functional Partners:
ENSHCOP00000009027
SH3 domain-containing protein.
    
 0.803
ENSHCOP00000009056
Uncharacterized protein.
    
 0.803
ENSHCOP00000023126
Uncharacterized protein.
    
 0.803
ENSHCOP00000027446
Uncharacterized protein.
    
 0.803
ENSHCOP00000027460
Uncharacterized protein.
    
 0.803
gbf1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
    
 0.751
copg2
Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
 0.743
ap1g1
AP-1 complex subunit gamma.
    
 0.741
arfgap1
ADP-ribosylation factor GTPase activating protein 1.
   
 0.712
ENSHCOP00000012679
Uncharacterized protein.
   
 0.700
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.