STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bnip1BCL2 interacting protein 1a. (228 aa)    
Predicted Functional Partners:
use1
Unconventional SNARE in the ER 1 homolog (S. cerevisiae).
    
 0.955
LOC109520489
SEC22 homolog B, vesicle trafficking protein a; Belongs to the synaptobrevin family.
    
 0.949
LOC109529737
SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family.
    
 0.949
stx18
Syntaxin 18.
    
 0.942
napg
N-ethylmaleimide-sensitive factor attachment protein, gamma b.
    
  0.620
zw10
Zw10 kinetochore protein.
     
 0.608
LOC109507218
N-ethylmaleimide-sensitive factor attachment protein, beta b.
    
  0.517
napa
N-ethylmaleimide-sensitive factor attachment protein, alpha b.
    
  0.517
NSF
N-ethylmaleimide sensitive factor, vesicle fusing ATPase; Belongs to the AAA ATPase family.
    
  0.517
LOC109530164
N-ethylmaleimide-sensitive factor b.
    
  0.517
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.