tbx1 protein (Hippocampus comes) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

tbx1

T-box transcription factor 1. (513 aa)

Predicted Functional Partners:

LOC109523674

0.683

PRICKLE1

0.640

ENSHCOP00000027331

0.626

VANGL2

0.622

nkx2-5

0.610

rchy1

0.608

VANGL1

0.603

Gnb1l

0.594

LOC109510308

0.549

LOC109528718

0.549

Your Current Organism:

Hippocampus comes

NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSHCOP00000027331	tbx1	ENSHCOP00000027331	ENSHCOP00000002795	Uncharacterized protein.	T-box transcription factor 1.	0.626
Gnb1l	tbx1	ENSHCOP00000002781	ENSHCOP00000002795	Guanine nucleotide binding protein (G protein), beta polypeptide 1-like.	T-box transcription factor 1.	0.594
LOC109510308	VANGL1	ENSHCOP00000009439	ENSHCOP00000001437	Uncharacterized protein.	Vang-like protein.	0.731
LOC109510308	VANGL2	ENSHCOP00000009439	ENSHCOP00000010661	Uncharacterized protein.	Vang-like protein.	0.778
LOC109510308	tbx1	ENSHCOP00000009439	ENSHCOP00000002795	Uncharacterized protein.	T-box transcription factor 1.	0.549
LOC109523674	VANGL1	ENSHCOP00000021930	ENSHCOP00000001437	Prickle homolog 1b.	Vang-like protein.	0.976
LOC109523674	VANGL2	ENSHCOP00000021930	ENSHCOP00000010661	Prickle homolog 1b.	Vang-like protein.	0.983
LOC109523674	tbx1	ENSHCOP00000021930	ENSHCOP00000002795	Prickle homolog 1b.	T-box transcription factor 1.	0.683
LOC109528718	VANGL1	ENSHCOP00000021392	ENSHCOP00000001437	Prickle homolog 2a.	Vang-like protein.	0.972
LOC109528718	VANGL2	ENSHCOP00000021392	ENSHCOP00000010661	Prickle homolog 2a.	Vang-like protein.	0.976
LOC109528718	tbx1	ENSHCOP00000021392	ENSHCOP00000002795	Prickle homolog 2a.	T-box transcription factor 1.	0.549
PRICKLE1	VANGL1	ENSHCOP00000004536	ENSHCOP00000001437	Prickle homolog 1a.	Vang-like protein.	0.978
PRICKLE1	VANGL2	ENSHCOP00000004536	ENSHCOP00000010661	Prickle homolog 1a.	Vang-like protein.	0.983
PRICKLE1	tbx1	ENSHCOP00000004536	ENSHCOP00000002795	Prickle homolog 1a.	T-box transcription factor 1.	0.640
VANGL1	LOC109510308	ENSHCOP00000001437	ENSHCOP00000009439	Vang-like protein.	Uncharacterized protein.	0.731
VANGL1	LOC109523674	ENSHCOP00000001437	ENSHCOP00000021930	Vang-like protein.	Prickle homolog 1b.	0.976
VANGL1	LOC109528718	ENSHCOP00000001437	ENSHCOP00000021392	Vang-like protein.	Prickle homolog 2a.	0.972
VANGL1	PRICKLE1	ENSHCOP00000001437	ENSHCOP00000004536	Vang-like protein.	Prickle homolog 1a.	0.978
VANGL1	VANGL2	ENSHCOP00000001437	ENSHCOP00000010661	Vang-like protein.	Vang-like protein.	0.909
VANGL1	tbx1	ENSHCOP00000001437	ENSHCOP00000002795	Vang-like protein.	T-box transcription factor 1.	0.603