STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109510486SRSF protein kinase 1a. (624 aa)    
Predicted Functional Partners:
LOC109523735
Serine and arginine rich splicing factor 5b.
    
 0.953
srsf6
Serine and arginine rich splicing factor 6a.
    
 0.953
LOC109513531
Serine and arginine rich splicing factor 4.
    
 0.953
srsf5
Serine and arginine rich splicing factor 5a.
    
 0.953
srsf1
Serine and arginine rich splicing factor 1a.
    
 0.940
LOC109515689
Uncharacterized protein.
    
 0.940
srsf2
Serine and arginine rich splicing factor 2a.
    
 0.937
ENSHCOP00000006753
RRM domain-containing protein.
    
 0.928
SRSF3
Serine and arginine rich splicing factor 3.
    
 0.924
LOC109531446
RRM domain-containing protein.
    
 0.924
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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