STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109517741SRY-box transcription factor 9b. (488 aa)    
Predicted Functional Partners:
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.559
egr2
Early growth response 2b.
    
 0.545
gata4
GATA binding protein 4.
    
 0.535
LOC109507234
Runt-related transcription factor.
   
 0.535
LOC109527971
POU domain protein.
    
 0.490
ENSHCOP00000012265
Doublesex and mab-3 related transcription factor 1.
    
 0.484
LOC109528744
Runt-related transcription factor.
   
 0.479
Runx3
Runt domain-containing protein.
   
 0.479
runx3
Runt-related transcription factor.
   
 0.479
ENSHCOP00000015842
Runt domain-containing protein.
   
 0.479
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.