STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109523157J domain-containing protein. (198 aa)    
Predicted Functional Partners:
gchfr
Uncharacterized protein.
      
 0.599
ENSHCOP00000010664
J domain-containing protein.
      
 0.585
cdc5l
CDC5 cell division cycle 5-like (S. pombe).
    
 
 0.570
rdm1
RRM domain-containing protein.
      
 0.471
DNAJC13
DnaJ heat shock protein family (Hsp40) member C13.
      
 0.471
LOC109514138
Cardiomyopathy associated 5.
      
 0.468
pfdn2
Prefoldin subunit 2.
      
 0.463
pah
Phenylalanine hydroxylase.
    
 
 0.439
stub1
STIP1 homology and U-Box containing protein 1.
   
 
 0.422
dnajc25
DnaJ (Hsp40) homolog, subfamily C, member 25.
    
 
 0.422
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.