STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HDAC3Histone deacetylase 3; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4), and some other non-histone substrates. Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. (428 aa)    
Predicted Functional Partners:
ncor2
Nuclear receptor corepressor 2.
    
 0.962
ncor1
Nuclear receptor corepressor 1.
    
 0.962
gps2
G protein pathway suppressor 2.
    
 0.943
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.942
ENSHCOP00000000064
ARID domain-containing protein.
   
 0.923
ENSHCOP00000000066
Tudor domain-containing protein.
   
 0.923
arid4b
Translocase of outer mitochondrial membrane 20.
   
 0.923
rbbp4
Retinoblastoma binding protein 4.
   
 0.918
LOC109531218
Transducin beta like 1 X-linked.
   
 0.865
LOC109520496
Transducin (beta)-like 1 X-linked receptor 1b.
   
 0.865
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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