STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ergic1Endoplasmic reticulum-golgi intermediate compartment 1. (290 aa)    
Predicted Functional Partners:
gtpbp3
GTP binding protein 3, mitochondrial.
  
 0.962
trmu
tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase.
  
 0.833
surf4
Surfeit 4.
   
 
 0.653
yars1
Tyrosine--tRNA ligase.
  
  
 0.651
eprs1
Glutamyl-prolyl-tRNA synthetase.
  
  
 0.587
oxa1l
OXA1L mitochondrial inner membrane protein.
  
  
 0.565
LOC109508337
Cytochrome c oxidase assembly factor COX18.
  
  
 0.565
lman1
Lectin, mannose-binding, 1.
   
  
 0.555
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
  
 0.531
acod1
Aconitate decarboxylase 1.
   
 
 0.494
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.