STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSHCOP00000003669Zgc:101731. (164 aa)    
Predicted Functional Partners:
vamp7
Synaptobrevin-like 1; Belongs to the synaptobrevin family.
    
 0.807
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
 0.758
LOC109527069
Syntaxin binding protein 1a; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.686
LOC109531989
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.686
stxbp3
Syntaxin binding protein 3; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.686
LOC109507790
Syntaxin binding protein 2; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.686
haus8
Uncharacterized protein.
    
 0.646
scfd1
Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.645
LOC109525032
Vesicle-associated membrane protein 8 (endobrevin).
   
 0.637
VAMP3
Vesicle associated membrane protein 3.
   
 0.637
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.