STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cars1Cysteinyl-tRNA synthetase. (826 aa)    
Predicted Functional Partners:
pigl
Phosphatidylinositol glycan anchor biosynthesis, class L.
  
 
 0.946
eef1g
Eukaryotic translation elongation factor 1 gamma.
   
 0.934
cars2
Cysteinyl-tRNA synthetase 2, mitochondrial.
  
  
0.903
yars1
Tyrosine--tRNA ligase.
  
 
 0.875
eprs1
Glutamyl-prolyl-tRNA synthetase.
  
  
 0.853
mars1
Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.850
LOC109531695
Valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.848
lars1
Leucyl-tRNA synthetase b; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.813
lars2
Leucyl-tRNA synthetase 2, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.774
tpi1
Triosephosphate isomerase.
 
 
  
 0.752
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.