STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109507180Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (165 aa)    
Predicted Functional Partners:
xab2
XPA binding protein 2.
   
 0.973
prpf19
Pre-mRNA processing factor 19.
    
 0.964
aqr
Aquarius intron-binding spliceosomal factor.
    
 0.958
crnkl1
Crooked neck pre-mRNA splicing factor 1.
   
 0.953
snw1
SNW domain containing 1.
   
 0.945
bud31
BUD31 homolog.
   
 0.944
rbm22
RNA binding motif protein 22.
   
 0.935
syf2
SYF2 pre-mRNA-splicing factor.
    
 0.911
LOC109525332
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
  
0.906
LOC109522402
ISY1 splicing factor homolog.
   
  0.904
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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