Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC109519111 | LOC109520495 | ENSHCOP00000008168 | ENSHCOP00000017004 | MFS domain-containing protein. | Si:ch211-38m6.6. | 0.902 |
LOC109519111 | mfsd8 | ENSHCOP00000008168 | ENSHCOP00000004189 | MFS domain-containing protein. | Major facilitator superfamily domain containing 8. | 0.900 |
LOC109519111 | mpl | ENSHCOP00000008168 | ENSHCOP00000003665 | MFS domain-containing protein. | MPL proto-oncogene, thrombopoietin receptor. | 0.637 |
LOC109520495 | LOC109519111 | ENSHCOP00000017004 | ENSHCOP00000008168 | Si:ch211-38m6.6. | MFS domain-containing protein. | 0.902 |
LOC109520495 | mfsd8 | ENSHCOP00000017004 | ENSHCOP00000004189 | Si:ch211-38m6.6. | Major facilitator superfamily domain containing 8. | 0.900 |
LOC109520495 | mpl | ENSHCOP00000017004 | ENSHCOP00000003665 | Si:ch211-38m6.6. | MPL proto-oncogene, thrombopoietin receptor. | 0.637 |
MFSD12 | mfsd8 | ENSHCOP00000020990 | ENSHCOP00000004189 | Major facilitator superfamily domain containing 12. | Major facilitator superfamily domain containing 8. | 0.599 |
NAA15 | mfsd8 | ENSHCOP00000010276 | ENSHCOP00000004189 | N(alpha)-acetyltransferase 15, NatA auxiliary subunit. | Major facilitator superfamily domain containing 8. | 0.587 |
cln3 | cln5 | ENSHCOP00000005680 | ENSHCOP00000007081 | Battenin. | CLN5 intracellular trafficking protein. | 0.716 |
cln3 | cln6 | ENSHCOP00000005680 | ENSHCOP00000014475 | Battenin. | CLN6 transmembrane ER protein a. | 0.686 |
cln3 | mfsd8 | ENSHCOP00000005680 | ENSHCOP00000004189 | Battenin. | Major facilitator superfamily domain containing 8. | 0.654 |
cln3 | ppt1 | ENSHCOP00000005680 | ENSHCOP00000018995 | Battenin. | Palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile). | 0.703 |
cln5 | cln3 | ENSHCOP00000007081 | ENSHCOP00000005680 | CLN5 intracellular trafficking protein. | Battenin. | 0.716 |
cln5 | cln6 | ENSHCOP00000007081 | ENSHCOP00000014475 | CLN5 intracellular trafficking protein. | CLN6 transmembrane ER protein a. | 0.773 |
cln5 | mfsd8 | ENSHCOP00000007081 | ENSHCOP00000004189 | CLN5 intracellular trafficking protein. | Major facilitator superfamily domain containing 8. | 0.623 |
cln5 | ppt1 | ENSHCOP00000007081 | ENSHCOP00000018995 | CLN5 intracellular trafficking protein. | Palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile). | 0.682 |
cln6 | cln3 | ENSHCOP00000014475 | ENSHCOP00000005680 | CLN6 transmembrane ER protein a. | Battenin. | 0.686 |
cln6 | cln5 | ENSHCOP00000014475 | ENSHCOP00000007081 | CLN6 transmembrane ER protein a. | CLN5 intracellular trafficking protein. | 0.773 |
cln6 | mfsd8 | ENSHCOP00000014475 | ENSHCOP00000004189 | CLN6 transmembrane ER protein a. | Major facilitator superfamily domain containing 8. | 0.622 |
cln6 | ppt1 | ENSHCOP00000014475 | ENSHCOP00000018995 | CLN6 transmembrane ER protein a. | Palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile). | 0.683 |
page 1 of 2