STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109509858Uncharacterized protein. (1136 aa)    
Predicted Functional Partners:
ints5
Integrator complex subunit 5.
    
   0.868
ints3
Integrator complex subunit 3.
    
   0.868
ints1
Integrator complex subunit 1.
    
   0.868
Znf592
Zinc finger protein 592.
    
 
 0.677
znf532
Zinc finger protein 532.
    
 
 0.540
LOC109530718
Si:dkey-40c11.2.
    
   0.525
dbnl
Drebrin-like b.
    
   0.525
dbn1
Drebrin 1.
    
   0.525
ENSHCOP00000008088
Testis specific protein Y-linked; Belongs to the nucleosome assembly protein (NAP) family.
   
 
 0.479
LOC109519254
Integrator complex subunit 6.
    
   0.444
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.