STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prkaa1Non-specific serine/threonine protein kinase. (569 aa)    
Predicted Functional Partners:
prkag1
Protein kinase, AMP-activated, gamma 1 non-catalytic subunit.
   
 0.988
LOC109510918
Protein kinase, AMP-activated, beta 1 non-catalytic subunit, b.
    
 0.988
PRKAB2
Protein kinase AMP-activated non-catalytic subunit beta 2.
    
 0.984
LOC109519277
Protein kinase, AMP-activated, gamma 3b non-catalytic subunit.
   
 0.984
LOC109521327
Protein kinase, AMP-activated, gamma 2 non-catalytic subunit b.
   
 0.984
mtor
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.975
LOC109525278
Uncharacterized protein.
    
 0.953
LOC109524381
Calcium binding protein 39, like 1.
    
 0.952
LOC109520879
Calcium binding protein 39-like.
    
 0.952
cab39
Calcium binding protein 39.
    
 0.952
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.