Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| dntt | exo1 | ENSHCOP00000004408 | ENSHCOP00000006332 | DNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family. | Exonuclease 1. | 0.630 |
| dntt | lig1 | ENSHCOP00000004408 | ENSHCOP00000023890 | DNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family. | DNA ligase. | 0.753 |
| dntt | lig3 | ENSHCOP00000004408 | ENSHCOP00000007928 | DNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family. | DNA ligase. | 0.662 |
| dntt | lig4 | ENSHCOP00000004408 | ENSHCOP00000023467 | DNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family. | DNA ligase. | 0.743 |
| dntt | pnkp | ENSHCOP00000004408 | ENSHCOP00000024663 | DNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family. | Polynucleotide kinase 3'-phosphatase. | 0.628 |
| dntt | prkdc | ENSHCOP00000004408 | ENSHCOP00000009008 | DNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family. | Protein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family. | 0.623 |
| dntt | rec114 | ENSHCOP00000004408 | ENSHCOP00000000083 | DNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family. | REC114 meiotic recombination protein. | 0.628 |
| dntt | xrcc1 | ENSHCOP00000004408 | ENSHCOP00000004092 | DNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family. | X-ray repair complementing defective repair in Chinese hamster cells 1. | 0.836 |
| dntt | xrcc5 | ENSHCOP00000004408 | ENSHCOP00000026645 | DNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family. | X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. | 0.646 |
| dntt | xrcc6 | ENSHCOP00000004408 | ENSHCOP00000007729 | DNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family. | X-ray repair complementing defective repair in Chinese hamster cells 6. | 0.697 |
| exo1 | dntt | ENSHCOP00000006332 | ENSHCOP00000004408 | Exonuclease 1. | DNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family. | 0.630 |
| exo1 | lig1 | ENSHCOP00000006332 | ENSHCOP00000023890 | Exonuclease 1. | DNA ligase. | 0.907 |
| exo1 | lig3 | ENSHCOP00000006332 | ENSHCOP00000007928 | Exonuclease 1. | DNA ligase. | 0.792 |
| exo1 | lig4 | ENSHCOP00000006332 | ENSHCOP00000023467 | Exonuclease 1. | DNA ligase. | 0.854 |
| exo1 | pnkp | ENSHCOP00000006332 | ENSHCOP00000024663 | Exonuclease 1. | Polynucleotide kinase 3'-phosphatase. | 0.474 |
| exo1 | prkdc | ENSHCOP00000006332 | ENSHCOP00000009008 | Exonuclease 1. | Protein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family. | 0.600 |
| exo1 | rec114 | ENSHCOP00000006332 | ENSHCOP00000000083 | Exonuclease 1. | REC114 meiotic recombination protein. | 0.474 |
| exo1 | xrcc1 | ENSHCOP00000006332 | ENSHCOP00000004092 | Exonuclease 1. | X-ray repair complementing defective repair in Chinese hamster cells 1. | 0.816 |
| exo1 | xrcc5 | ENSHCOP00000006332 | ENSHCOP00000026645 | Exonuclease 1. | X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. | 0.862 |
| exo1 | xrcc6 | ENSHCOP00000006332 | ENSHCOP00000007729 | Exonuclease 1. | X-ray repair complementing defective repair in Chinese hamster cells 6. | 0.925 |
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