STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gnb1Guanine nucleotide binding protein (G protein), beta polypeptide 1a. (340 aa)    
Predicted Functional Partners:
LOC109527668
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
 0.990
LOC109510657
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
   
 0.978
LOC109511837
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
   
 0.977
ENSHCOP00000021445
Rhodopsin.
    
 0.970
LOC109531480
Rhodopsin.
    
 0.970
pde6g
Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.
   
 
 0.939
pde6b
Phosphodiesterase.
     
 0.924
ADGRL3
Adhesion G protein-coupled receptor L3; Belongs to the G-protein coupled receptor 2 family.
   
   0.894
ENSHCOP00000004888
SUEL-type lectin domain-containing protein.
   
   0.894
LOC109511332
Adhesion G protein-coupled receptor L3.1; Belongs to the G-protein coupled receptor 2 family.
   
   0.894
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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