STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSHCOP00000004792Uncharacterized protein. (387 aa)    
Predicted Functional Partners:
ENSHCOP00000022816
Uncharacterized protein.
 
  
 
 0.910
ENSHCOP00000007693
Uncharacterized protein.
 
 
 0.822
LOC109510662
Macrophage stimulating 1 receptor a.
    
 0.718
met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.718
mst1r
Macrophage stimulating 1 receptor b.
    
 0.718
ENSHCOP00000004715
Ig-like domain-containing protein.
 
  
 
 0.686
ENSHCOP00000022759
Alpha-carbonic anhydrase domain-containing protein.
 
 
 0.636
farp2
FERM, RhoGEF and pleckstrin domain protein 2.
 
      0.610
ENSHCOP00000008709
Protein tyrosine phosphatase non-receptor type 13.
 
 
   0.552
rpl13a
Ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.
   
  0.480
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.