STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109522163ELKS/RAB6-interacting/CAST family member 2. (929 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
    
 
 0.872
LOC109523177
Regulating synaptic membrane exocytosis 1a.
    
 
 0.441
RIMS1
Regulating synaptic membrane exocytosis 1.
    
 
 0.432
ENSHCOP00000015250
C2 domain-containing protein.
    
 
 0.432
rims3
Regulating synaptic membrane exocytosis 3.
    
 
 0.432
ppfia1
PTPRF interacting protein alpha 1.
    
 
 0.402
LOC109527757
PTPRF interacting protein alpha 3.
    
 
 0.402
ppfia4
PTPRF interacting protein alpha 4.
    
 
 0.402
ppfia2
PTPRF interacting protein alpha 2.
    
 
 0.402
ENSHCOP00000026810
Uncharacterized protein.
    
 
 0.402
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.