STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppp1r18Uncharacterized protein. (560 aa)    
Predicted Functional Partners:
GRXCR2
Glutaredoxin and cysteine rich domain containing 2.
     
 0.701
LOC109517394
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.626
PPP1CB
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.626
tmem44
Transmembrane protein 44.
      
 0.618
npdc1
Neural proliferation, differentiation and control, 1a.
      
 0.580
ENSHCOP00000026778
Melanin-concentrating hormone receptor 1a.
      
 0.569
grxcr1
Glutaredoxin and cysteine rich domain containing 1 a.
     
 0.559
ENSHCOP00000007932
Glutaredoxin and cysteine rich domain containing 1 b.
     
 0.559
LOC109507236
Chloride intracellular channel protein; Belongs to the chloride channel CLIC family.
    
 0.512
clic1
Chloride intracellular channel protein; Belongs to the chloride channel CLIC family.
    
 0.512
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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