STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abcc8ATP-binding cassette, sub-family C (CFTR/MRP), member 8. (1566 aa)    
Predicted Functional Partners:
Kcnj11
Potassium inwardly-rectifying channel, subfamily J, member 11.
 
 
 0.964
LOC109532686
Potassium inwardly-rectifying channel, subfamily J, member 8.
 
 
 0.941
rapgef4
Rap guanine nucleotide exchange factor (GEF) 4.
    
 0.627
LOC109507461
Zgc:171558.
    
 0.627
rapgef3
Rap guanine nucleotide exchange factor (GEF) 3.
    
 0.621
LOC109518256
Potassium inwardly-rectifying channel, subfamily J, member 11, like.
 
 
 0.581
katnal2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 0.530
gopc
Golgi-associated PDZ and coiled-coil motif containing.
   
 0.460
usp10
Ubiquitin carboxyl-terminal hydrolase.
    
  0.448
KCNJ1
Potassium voltage-gated channel subfamily J member 1.
 
  
 0.422
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.