STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rcn3Reticulocalbin 3, EF-hand calcium binding domain. (316 aa)    
Predicted Functional Partners:
LOC109524765
Proline rich Gla (G-carboxyglutamic acid) 2.
      
 0.580
med25
Mediator complex subunit 25.
     
 0.474
nosip
Nitric oxide synthase-interacting protein; Negatively regulates nitric oxide production by inducing nitric oxide synthase translocation to actin cytoskeleton and inhibiting its enzymatic activity; Belongs to the NOSIP family.
      
 0.471
LOC109519358
Shisa family member 9b.
      
 0.471
fam20c
Fam20C domain-containing protein.
    
  0.423
LOC109522750
FAM20C golgi associated secretory pathway kinase a.
    
  0.423
LOC109507439
Calreticulin.
   
 
 0.419
LOC109532019
Calreticulin.
   
 
 0.419
LOC109525234
Calreticulin.
   
 
 0.419
fam20b
FAM20B glycosaminoglycan xylosylkinase.
     
 0.418
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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