Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSHCOP00000017593 | scg5 | ENSHCOP00000017593 | ENSHCOP00000007076 | Synaptosomal-associated protein; Belongs to the SNAP-25 family. | Secretogranin V. | 0.409 |
LOC109506885 | scg3 | ENSHCOP00000016612 | ENSHCOP00000017584 | Secretogranin II (chromogranin C), b. | Secretogranin III. | 0.505 |
LOC109506885 | scg5 | ENSHCOP00000016612 | ENSHCOP00000007076 | Secretogranin II (chromogranin C), b. | Secretogranin V. | 0.478 |
LOC109508163 | scg5 | ENSHCOP00000018904 | ENSHCOP00000007076 | Synaptosomal-associated protein; Belongs to the SNAP-25 family. | Secretogranin V. | 0.409 |
mbtps1 | pcsk7 | ENSHCOP00000023672 | ENSHCOP00000011303 | Membrane-bound transcription factor peptidase, site 1. | Proprotein convertase subtilisin/kexin type 7; Belongs to the peptidase S8 family. | 0.570 |
mbtps1 | scg5 | ENSHCOP00000023672 | ENSHCOP00000007076 | Membrane-bound transcription factor peptidase, site 1. | Secretogranin V. | 0.456 |
pam | scg5 | ENSHCOP00000024944 | ENSHCOP00000007076 | Peptidylglycine alpha-amidating monooxygenase. | Secretogranin V. | 0.539 |
pcsk1 | scg5 | ENSHCOP00000010369 | ENSHCOP00000007076 | Proprotein convertase subtilisin/kexin type 1; Belongs to the peptidase S8 family. | Secretogranin V. | 0.467 |
pcsk2 | scg5 | ENSHCOP00000026719 | ENSHCOP00000007076 | Proprotein convertase subtilisin/kexin type 2; Belongs to the peptidase S8 family. | Secretogranin V. | 0.877 |
pcsk7 | mbtps1 | ENSHCOP00000011303 | ENSHCOP00000023672 | Proprotein convertase subtilisin/kexin type 7; Belongs to the peptidase S8 family. | Membrane-bound transcription factor peptidase, site 1. | 0.570 |
pcsk7 | scg5 | ENSHCOP00000011303 | ENSHCOP00000007076 | Proprotein convertase subtilisin/kexin type 7; Belongs to the peptidase S8 family. | Secretogranin V. | 0.500 |
scg2 | scg3 | ENSHCOP00000025845 | ENSHCOP00000017584 | Uncharacterized protein. | Secretogranin III. | 0.505 |
scg2 | scg5 | ENSHCOP00000025845 | ENSHCOP00000007076 | Uncharacterized protein. | Secretogranin V. | 0.478 |
scg3 | LOC109506885 | ENSHCOP00000017584 | ENSHCOP00000016612 | Secretogranin III. | Secretogranin II (chromogranin C), b. | 0.505 |
scg3 | scg2 | ENSHCOP00000017584 | ENSHCOP00000025845 | Secretogranin III. | Uncharacterized protein. | 0.505 |
scg3 | scg5 | ENSHCOP00000017584 | ENSHCOP00000007076 | Secretogranin III. | Secretogranin V. | 0.646 |
scg5 | ENSHCOP00000017593 | ENSHCOP00000007076 | ENSHCOP00000017593 | Secretogranin V. | Synaptosomal-associated protein; Belongs to the SNAP-25 family. | 0.409 |
scg5 | LOC109506885 | ENSHCOP00000007076 | ENSHCOP00000016612 | Secretogranin V. | Secretogranin II (chromogranin C), b. | 0.478 |
scg5 | LOC109508163 | ENSHCOP00000007076 | ENSHCOP00000018904 | Secretogranin V. | Synaptosomal-associated protein; Belongs to the SNAP-25 family. | 0.409 |
scg5 | mbtps1 | ENSHCOP00000007076 | ENSHCOP00000023672 | Secretogranin V. | Membrane-bound transcription factor peptidase, site 1. | 0.456 |
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