STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109528874Uncharacterized protein. (1152 aa)    
Predicted Functional Partners:
LOC109520909
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
  0.552
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
  0.552
rbsn
Rabenosyn, RAB effector.
      
 0.471
ENSHCOP00000004244
Uncharacterized protein.
    
 0.461
LOC109523736
RAB15, member RAS oncogene family.
    
 0.461
garem2
GRB2 associated, regulator of MAPK1-like.
    
 0.461
garem1
GRB2 associated, regulator of MAPK1.
    
 0.461
rab8b
Multiple EGF-like-domains 8.
    
 0.461
LOC109516018
RAB15, member RAS oncogene family.
    
 0.461
RAB8A
RAB8A, member RAS oncogene family.
    
 0.461
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.