STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prickle3Prickle homolog 3. (768 aa)    
Predicted Functional Partners:
VANGL1
Vang-like protein.
    
 0.968
VANGL2
Vang-like protein.
    
 0.968
LOC109531620
Uncharacterized protein.
    
 0.962
dvl2
Dishevelled segment polarity protein 2.
    
 0.962
LOC109531263
Vang-like protein.
    
 0.935
ENSHCOP00000000467
ANK_REP_REGION domain-containing protein.
   
 0.660
dvl1
Dishevelled segment polarity protein 1a.
    
 0.642
invs
Inversin.
   
 0.550
opn3
Opsin 3.
      
 0.536
LOC109521297
Rho GTPase activating protein 21b.
    
 
 0.477
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.